PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012569900.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 768aa    MW: 86093.9 Da    PI: 4.3611
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012569900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.000345856211354
                     HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R++i +++ eLr ++P+      +K s  + L ++++Y+  L
  XP_012569900.1 585 RQQIQDCIKELRGIIPHG-----GKCSIDSLLDRTIRYMLFL 621
                     89***************8.....7888888999999999877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142152.1E-1453135IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088810.575572621IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.28E-5585635IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    Send to blast
MAMTMPLSLR NKLKTLCACG DGWSYAIFWR FHKTNPMLLT VEESYYEEQL GEEIAKLLPQ  60
VHLLGEGIVG EAAFSDKHNW LHSVSYEDDS GLYQQFSSGI KTIVVIPIKS WGVVQFGSTN  120
KILETINFLD QTQSLLKEID DMDMIEVSGN ELLPMDFANY DLNGLLASIS TENSCDWTLK  180
YTLDENYDEL REVYSSTNPN DPFSSQHKTC EETSSLSDQL NGTIEAYLDP DSSMNDNLIS  240
KTSLFGEWCG ENSSFDSLGQ QFASEIMAQE VVDVCTSFDS SIVHDSAFVS LDKGSSFQDN  300
HSSEPVVVTD VVLPSSSIEP VDMSEEFLKL SSLDDLCQWF APSTDDSICT TMIQLDNNLP  360
ESIEFNPTLA EHNTITTTVN SEMKETSVLI HSSENDFLDN LELDLGCDQS SEWWGNLLTP  420
MVSTATDIGF SECISELNYT TTLTDNRKRL FSELGGIEEL LKGQANYNNP FNSSNFENEL  480
LSSNKRQMVE FSSMSRTQVN FASLVGAEAG PNLMQSVSDL EKSNSVLTKK DTFPKLQVGM  540
LINDRNSINM KRGVSLHPKK QEEPTKPTKK KAKPGESTRP RPKDRQQIQD CIKELRGIIP  600
HGGKCSIDSL LDRTIRYMLF LRSVIKYADM IHEPNEPKLI EQANGVVPKD SENRGATWAF  660
EVGNQTMVCP IIVEDMNPPG QMLIEMLCED QGFFLEIVDI IKGFGLNILK AKMEIKKSKL  720
WGRFIVEANR HVTRIDVFWS LIHLLQQPNI TGSDSSNKHS NVIDANIA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012569900.10.0PREDICTED: transcription factor bHLH157
TrEMBLA0A072VNC60.0A0A072VNC6_MEDTR; BHLH transcription factor-like protein
STRINGGLYMA20G35921.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69551621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.12e-42conserved peptide upstream open reading frame 7